Session 51 – Leveraging the microbiome for resilience and sustainability in ruminant production – insights from H2020 HoloRuminant

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Theater

How does the cow’s microbiome respond to physiological challenges?
J. Seifert

Upper respiratory tract microbiota of dairy calves experimentally challenged with BRSV
S. O’Donoghue, B. Earley, M.S. McCabe, D. Johnston, K. Ní Dhufaigh, S.L. Cosby, D.W. Morris and S.M. Waters

Differential effects of Ostertagia ostertagi vaccination and infection on the rumen microbiome
J. Lima, T.N. McNeilly, P. Steele, M. Martínez-Álvaro, M.D. Auffret, R.J. Dewhurst, M. Watson and R. Roehe

Novel ruminal microbiome solutions to reducing enteric methane emissions
T.A. McAllister, L.L. Guan and R.I. Mackie

Relationship between feed efficiency and rumen microbiota in feedlot bulls fed contrasting diets
A. Ortiz-Chura, M. Popova, G. Cantalapiedra-Hijar and D. Morgavi

Establishment and evolution of ruminotypes of lactating Lacaune ewes
T. Blanchard, C. Marie-Etancelin, Y. Farizon, C. Allain and A. Meynadier

Effect of colostrum source and calf breed on diarrhoea incidents in pre-weaned dairy calves
S. Scully, P.E. Smith, B. Earley, C. McAloon and S.M. Waters

Metagenome strain deconvolution and abundance estimation enabled by low-error long-read DNA sequence
D. Bickhart, M. Kolmogorov, E. Tseng, P. Pevzner and T. Smith

Stakeholders views regarding new practices to control microbiomes
F. Bedoin, A. Ait-Sidhoum, E. Vanbergue, A. Stygar, T. Latvala, Á. MacKen-walsh, S. Waters, P. Smith and J.K. Niemi

Poster

Temporal establishment of the colon microbiota in angus calves from birth to post-weaning
M. Stafford, P. Smith, S. Waters, F. Buckley, E. O’Hara and D. Kenny

Preliminary study of faecal microbiota in a selection experiment for birth weight variability in mice
L. El-Ouazizi El-Kahia, N. Formoso-Rafferty, J.P. Gutiérrez, C. Esteban Blanco, J.J. Arranz and I. Cervantes

The effects of crude protein levels on rumen microbiome and CH<sub>4</sub> of the fattening Hanwoo steers
H. Kim, H. Cho, S. Jeong, K. Kang, S. Jeon, M. Lee, H. Kang, S. Lee, S. Seo and J. Seo

Rumen metabolites of periparturient cows varying in SARA susceptibility modify fermentation in vitro
H. Yang, S. Heirbaut, J. Jeyanathan, X.P. Jing, N. De Neve, L. Vandaele and V. Fievez

Prevalence of resistant E. coli and their transmission among dairy cattle in Swiss tie stalls
B. Köchle, V. Bernier Gosselin and J. Becker

Stability of a Bacillus-based DFM following preparation of a milk replacer and premix
G. Copani, A. Segura, N. Milora, M. Schjelde and B.I. Cappellozza

Effects of a Bacillus-based direct-fed microbial on performance and digestibility of lactating cows
M. Terré, N. Prat, D. Sabrià and B. Cappellozza

Stability of a Bacillus-based direct-fed microbial post-palletisation under different temperatures
B. Cappellozza, C. Galschioet and G. Copani

Microbial signals in peripheral blood mononuclear cells of Australian Angus cattle
P. Alexandre, A. Wilson, T. Legrand, R. Farr, S. Denman and A. Reverter

Metabarcoding of milk, faeces and ruminal fluid of Sarda ewes fed with Alfalfa (Medicago sativa)
A. Vanzin, D. Giannuzzi, G. Zardinoni, A. Cecchinato, N. Macciotta, F. Correddu, A. Atzori, S. Carta, A. Ledda, S. Schiavon, L. Gallo and S. Pegolo

An experimental approach for assessing causal microbes in early life diarrhoea in lambs
L. Voland, D. Graviou, K. Vazeille, A. Ortiz-Chura, D.P. Morgavi and M. Popova

Mycotoxin-deactivating feed additive supplementation in dairy cows fed Fusarium-contaminated diet
A. Catellani, Y. Han, V. Bisutti, F. Ghilardelli, F. Fumagalli, E. Trevisi, A. Ceccinato, H. Swamy, S. Van Kuijk and A. Gallo

Effects of 3-NOP on enteric methane production in growing beef cattle offered a forage based diet
S.F. Kirwan, L.F.M. Tamassia, N.D. Walker, A. Karagiannis, M. Kindermann and S.M. Waters