Session 84 – EuroFAANG: genotype-to-phenotype research across Europe and beyond

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Theater

EuroFAANG – an infrastructure for farmed animal genotype to phenotype research in Europe and beyond
E.L. Clark, E. Giuffra, A. Granados-Chapette, M. Groenen, P.W. Harrison, C. Kaya, S. Lien, M. Tixier-Boichard and C. Kuehn

GENE-SWitCH: improving the functional annotation of pig and chicken genomes for precision breeding
E. Giuffra, H. Acloque, A.L. Archibald, M.C.A.M. Bink, M.P.L. Calus, P.W. Harrison, C. Kaya, W. Lackal, F. Martin, A. Rosati, M. Watson and J.M. Wells

Genome-wide association studies for body weight in broilers using sequencing and SNP chip data
E. Tarsani, V. Riggio and A. Kranis

Using methylation annotation to improve genomic prediction of gene expression in pigs
B.C. Perez, J. De Vos, D. Crespo-Piazuello, M.C.A.M. Bink, M. Ballester, M.J. Mercat, O. Madsen and M.P.L. Calus

The path from functional annotation towards improved genomic prediction in cattle
C. Kühn

Biology-driven genomic predictions for dry matter intake within and across breeds using WGS data
R. Bonifazi, G. Plastow, M. Heidaritabar, A.C. Bouwman, L. Chen, P. Stothard, J. Basarb, C. Li, Bovreg Consortium and B. Gredler-Grandl

Newly annotated genomic features for biology-driven genome selection: the BovReg contribution
G.C.M. Moreira, L. Tang, S. Dupont, M. Bhati, H. Pausch, D. Becker, M. Salavati, R. Clark, E.L. Clark, G. Plastow, C. Kühn, C. Charlier and The Bovreg Consortium

AQUA-FAANG: decoding genome function to enhance genotype-to-phenotype prediction in farmed finfish
D. MacQueen and S. Lien

Integrating functional annotation data in genomic prediction of VNN resistance in European sea bass
S. Faggion, R. Mukiibi, L. Peruzza, M. Babbucci, R. Franch, G. Dalla Rovere, S. Ferraresso, D. Robledo and L. Bargelloni

GEroNIMO (Genome and Epigenome eNabled breedIng in MOnogastrics)
S. Lagarrigue, F. Pitel and T. Zerjal

RUMIGEN: new breeding tools in a context of climate change
S. Mattalia, A. Vinet, M.P.L. Calus, H.A. Mulder, M.J. Carabaño, C. Diaz, M. Ramon, S. Aguerre, J. Promp, R. Vallée, B.C.D. Cuyabano, D. Boichard, E. Pailhoux and J. Vandenplas

The genetic basis of ruminant microbiomes – contribution of the HoloRuminant project
Y. Ramayo-Caldas, I. Mizrahi, P. Pope, C. Creevey, J.P. Sanchez, R. Quintanilla and D. Morgavi

Poster

The effect of production systems on adipose tissue gene expression in Krškopolje pig
K. Poklukar, M. Čandek-Potokar, N. Batorek-Lukač, M. Vrecl, G. Fazarinc and M. Škrlep

A lncRNA gene-enriched atlas for GRCg7b chicken genome using Ensembl, RefSeq and two FAANG databases
F. Degalez, M. Charles, S. Foissac, H. Zhou, D. Guan, L. Fang, C. Klopp, F. Lecerf, T. Zerjal, F. Pitel and S. Lagarrigue