Session 42. Development of methods to analyse complex data

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Date: Wednesday 29 August 2018; 14.00 – 18.00
Chair: N. Ibañez-Escriche

Theatre Session 42

A model-based approach to characterize individual autozygosity at global and local genomic scale
T. Druet and M. Gautier
invited

A combined physical-genetic map for dairy cattle
A. Hampel, F. Teuscher and D. Wittenburg

Posterior probabilities of genome-wide associations in backcross families
M. Reichelt, M. Mayer, F. Teuscher and N. Reinsch

A sparse-group lasso variant for whole-genome regression models in half sibs
J. Klosa, N.R. Simon and D. Wittenburg

Theoretical basis to extend single-step genomic prediction of dominance in a pig population
R.R. Mota, S. Vanderick, F.G. Colinet, G.R. Wiggans, H. Hammami and N. Gengler

Genomic mating allocation model with dominance to maximize overall genetic merit in Landrace pigs
D. Gonzalez-Dieguez, C. Carillier-Jacquin, A. Bouquet, L. Tusell and Z.G. Vitezica

Construction of a genetic relationship matrix using linked markers
L. Gomez-Raya, W.M. Rauw, L. Silio, M.C. Rodriguez and L.A. Garcia Cortes

Efficient computational strategies for multivariate single-step SNPBLUP
J. Vandenplas, H. Eding and M.P.L. Calus

Ordination methods to build microbiota similarity matrices for complex traits prediction
A. Saborío-Montero and O. González-Recio

Integrating gene expression data into genomic prediction
Z.C. Li, N. Gao, W.R.M. Johannes and H. Simianer

Recursive binomial model to analyse piglet survival in a diallel cross between Iberian pigs
L. Varona, J.L. Noguera, J. Casellas, J.P. Rosas and N. Ibañez-Escriche

Structured antedependence model for longitudinal analysis of social effects on ADG in rabbits
I. David, J.P. Sanchez and M. Piles

Modelling of grouped recorded data for different population structures in pig breeding
M. Shirali, B. Nielsen, T. Ostersen, O.F. Christensen, P. Madsen, G. Su and J. Jensen

Poster Session 42

A modified penalised regression approach to precision-related questions in genomic evaluations
M. Doschoris and D. Wittenburg

A novel three-step approach to ascertain individual levels of genetic diversity within populations
M. Neuditschko, T. Druml, G. Grilz-Seger, M. Horna, A. Ricard, M. Mesarič, M. Cotman, H. Pausch and G. Brem

Predicting inbreeding depression load for litter size in Iberian pigs
J. Casellas, N. Ibáñez-Escriche, L. Varona, J.P. Rosas and J.L. Noguera

Principal component analysis of factors effecting reproductive performance of prolific sheep
E. Emsen, M. Kutluca Korkmaz and B.B. Odevci

Weighting SNP panels for genomic prediction by simulated annealing
M. Martín De Hijas-Villalba, L. Varona, J.L. Noguera, N. Ibáñez-Escriche and J. Casellas

Modeling heterozygosis by principal component in tropical beef composite
J.B.S. Ferraz, L. Grigoletto, E.C. Mattos, J.P. Eler and F. Baldi

Genetic correlation between gastrointestinal parasites resistance traits in sheep using the ssGBLUP
F. Carvalho, R. Silva, L. Grigoletto, J. Eler, J.B. Ferraz, G. Banchero, P. Oliveira, M. Berton and F. Baldi

Genetic parameters for original and transformed interval reproduction traits of sows
E. Žáková, E. Krupa, J. Wolf and Z. Krupová

Principal components regression for genetics analysis in Montana Composite cattle
B. Abreu Silva, J. Eler, F. Bussiman, E. Mattos, M.L. Santana Júnior and J.B. Ferraz