Session 66. Free communications: animal genetics

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Date: Thursday 30 August 2018; 14.00 – 18.00
Chair: E. Wall

Theatre Session 66

Methods for prediction of breeding values for young animals in single-step evaluations
E.C.G. Pimentel, C. Edel, R. Emmerling and K.-U. Götz

Variance estimates from the algorithm for proven and young animals are similar to current methods
M.N. Aldridge, J. Vandenplas, R. Bergsma and M.P.L. Calus

Accuracy of genomic prediction using a novel Bayesian GC approach
M.H. Kjetså, J. Ødegaard and T.H.E. Meuwissen

Single-step genomic REML with algorithm for proven and young and reduced pedigree
D. Lourenco, V.S. Junqueira, Y. Masuda and I. Misztal

Using the variable effect predictor with WGS data finds one causal variant for early death in calves
G.E. Pollott, M. Salavati and D.C. Wathes

Mapping for selection signatures associated with aggressive behaviour in cattle
P. Eusebi, O. Cortés, S. Dunner and J. Cañón

High resolution genomic analysis of four local Vietnamese chicken breeds
E. Moyse, V.D. Nguyen, A. Dor, D.T. Vu and F.P. Farnir

Understanding unmapped reads using Bos taurus whole genome DNA sequence
J. Szyda and M. Mielczarek

The impact of copy number variants on gene expression
M. Mielczarek, M. Fraszczak and J. Szyda

Foetal and maternal placenta cells respond differently to a deleterious foetal mutation
K. Rutkowska

Genomic regions influencing intramuscular fat in divergently selected rabbit populations
B.S. Sosa Madrid, P. Hernández, P. Navarro, C. Haley, L. Fontanesi, R.N. Pena, M.A. Santacreu, A. Blasco and N. Ibañez-Escriche

Identification of causal mutations underlying feet and leg disorders in cattle
T. Suchocki, C.H. Egger-Danner, H. Schwarzenbacher, M. Mielczarek and J. Szyda

Choice of statistical model highly affects QTL detection in a commercial broiler line
H. Romé, W. Mebratie, R. Hawken, J. Henshall and J. Jensen

Multilocus random-SNP-effect genome-wide association studies for health traits in horses
O. Distl, J. Metzger and B. Ohnesorge

Poster Session 66

Covariance estimation for yield and behavioural traits in Italian honey bee by linear-threshold model
S. Andonov, C. Costa, A. Uzunov, P. Bergomi, D. Lourenco and I. Misztal

Association between SNPs in LEP and LEPR genes with production traits in Ukrainian Large White pigs
Y. Oliinychenko, N. Saranceva, A. Saenko, V. Vovk, V. Balatsky and O. Doran

Detection of selection signatures in selected pig breeds using extended haplotype homozygosity test
A. Gurgul, K. Ropka-Molik, E. Semik-Gurgul, K. Pawlina-Tyszko, T. Szmatoła, M. Szyndler-Nędza, M. Bugno-Poniewierska, T. Blicharski, K. Szulc and E. Skrzypczak

Analysis of copy number variation regions in bovine genome
M. Frąszczak, M. Mielczarek, E. Nicolazzi, J.L. Williams and J. Szyda

Exploiting extreme phenotypes to investigate haplotype structure and detect signatures of selection
E. Tarsani, A. Kominakis, G. Theodorou and I. Palamidi

IGF1 and IGFBP2 polymorphisms in Hungarian Yellow and broiler chickens
K. Szalai, K. Tempfli, E. Lencsés-Varga and Á. Bali Papp

Genetic parameters for growth in Pietrain boars with implementation of social genetic effects
T. Flisar, M. Kovač and Š. Malovrh

Genetic and phenotypic correlation between survival rate and litter weight at birth in American mink
K. Karimi, M. Sargolzaei, Z. Wang, G.S. Plastow and Y. Miar

Frequency of genotypes associated with milk synthesis in sows of maternal breeds
M. Szyndler-Nędza, K. Ropka-Molik and A. Mucha

Effect of WNT10A c.303C>T gene polymorphism on reproductive traits in pigs
A. Mucha, K. Piórkowska, K. Ropka-Molik and M. Szyndler-Nędza

Alternative derivation method of MME from BLUP and restricted BLUP of breeding values not using ML
M. Satoh, S. Ogawa and Y. Uemoto

Meta-analysis of gene expression in chicken stimulated with prebiotic or synbiotic in ovo
A. Dunislawska, A. Slawinska, M. Bednarczyk and M. Siwek

Comet assay for analysis of DNA damage in sperm of Wistar rats treated with ilex extracts
A. Zwyrzykowska-Wodzińska, A. Tichá, R. Hyšpler, Z. Zadák, R. Štětina, A. Szumny and P. Kuropka

Cattle mitogenome sequence analyses revels the presence of selection
D. Novosel, V. Cubric-Curik, V. Brajkovic, S. Krebs, E. Kunz, C. Vernesi, I. Medugorac, O. Rota-Stabelli and I. Curik

The evaluation of PECR, FN1, PNKD and PLCD4 mutation effects on pig traits
K. Piórkowska, A. Stuczyńska, M. Tyra and K. Żukowski

Transcriptomic changes in broiler chicken hypothalamus depending on growth rate
K. Piórkowska, K. Żukowski, K. Połtowicz, J. Nowak, K. Ropka-Molik, D. Wojtysiak, N. Derebecka and J. Wesoły

Donkey individual identification and parentage verification using a specifically designed 22plex PCR
J.A. Bouzada, V. Landi, J.M. Lozano, M.R. Maya, A. Trigo, M.A. Martínez, M.M. Gómez, T. Mayoral, E. Anadón and L.B. Pitarch

Expression of miRNAs in placenta is associated with intrauterine growth restriction in cattle
K. Rutkowska, K. Flisikowski, M. Łukaszewicz and J. Oprządek

Preliminary results evaluating horn traits of economic importance in Hippotragus niger niger
G.C. Josling, A.A. Lepori, F.W.C. Neser, P.C. Lubout and J.B. Van Wyk

Fixed and random regression models for South African Holstein under two production systems
M. Van Niekerk, F.W.C. Neser and V. Ducrocq

The effect of SNPs in estrogen receptor gene on milk production traits in Slovak Spotted cattle
A. Trakovická, N. Moravčíková and R. Kasarda

Evaluation of milk quality of Sokolski cold-blooded and warmblood mares: preliminary results
G.M. Polak

Solving single-step GBLUP MME by extended KKT equations and block anti-triangular factorization
M. Taskinen, E.A. Mäntysaari and I. Strandén

Relationships between a TLR4 allele associated with IBK and production traits in dairy cattle
M.P. Mullen, M.C. McClure and J.F. Kearney

Precision gene editing of porcine MSTN by CRISPR/Cas9 and Cre/LoxP
Y. Bi

Panel of SNPs in genomic regions of candidate genes controlling milk production traits in cattle
N. Moravčíková, O. Kadlečík, A. Trakovická and R. Kasarda

Genetic polymorphism of CSN3 at four ecotypes of Serrana goat
F. Santos-Silva, I. Mineiro, C. Sousa, F. Pereira, I. Carolino, N. Carolino and J. Santos-Silva

Genomic evaluation on the French scale of Holstein bulls from a large Indian NGO
V. Ducrocq, D. Cruz Hidalgo, M. Boussaha, P.D. Deshpande, A.B. Pande and M. Swaminathan

Signatures of ‘merinization’ via principal component analysis
S. Megdiche, J.A. Lenstra and E. Ciani

GWAS on whole genome sequences for cheese-making traits and milk composition in Montbéliarde cows
M.-P. Sanchez, V. Wolf, M. El Jabri, S. Fritz, M. Boussaha, S. Taussat, C. Laithier, A. Delacroix-Buchet, M. Brochard and D. Boichard

Diversity of innate immunity genes in the Czech Simmental cattle
K. Novák, J. Kyselová, V. Czerneková, M. Hofmannová, T. Valčíková, K. Samake and M. Bjelka

Genetic analysis of a temperament test for working dog breeds in Sweden
E. Strandberg, H. Frögéli and S. Malm

Experiences in estimation of metafounders ancestral relationships of dairy sheep
A. Legarra and J.M. Astruc